| Breast Cancer Gene-Expression Miner v5.1 (bc-GenExMiner v5.1) | | |
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The tool and its use: |
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bc-GenExMiner v5.1 is a statistical mining tool of published
annotated breast cancer transcriptomic data
( DNA microarrays [n = 11 552] and
RNA-seq [n = 5 023]).
It offers the possibility to explore gene-expression of genes of interest in breast cancer.
The
statistical analyses are grouped in three modules: "correlation", "expression" and "prognostic"
(see flowchart).
Results are presented in tables, maps and various kinds of plots (hexbin, scatter plots; correlation matrix; box and whisker, bee swarm, violin, raincloud plots; Kaplan-Meier curves).
Description of bc-GenExMiner is detailed in
references.
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